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1.

Introduction

In men diagnosed with localized prostate cancer, risk

stratification based on conventional clinical parameters is

imprecise and accounts only for a fraction of interpatient

heterogeneity in treatment responses

[1]

. Although clini-

copathological indices such as percentage biopsy core

involvement and primary Gleason grade have been

proposed to improve upon existing stratification models,

these factors do not account for the intratumoral spatial

genomic heterogeneity that highlights the biological

complexity of multifocal prostate tumors

[2–4]

. To predict

the risks of biochemical relapse and metastasis following

definitive prostatectomy or radiotherapy, a series of

molecular indices have been proposed, including percent-

age of genome alteration (PGA)

[5,6]

. Likewise, other

microenvironmental factors such as hypoxia and sub-

pathologies such as intraductal carcinoma (IDC) and

cribriform architecture (CA) have been linked to therapeutic

resistance and disease recurrence

[7–9]

. Genomic profiling

of matched primary metastatic tumors has further revealed

the close relationship between tumor clones within the

metastases and IDC, affirming the unfavorable nature of this

subpathology

[10] .

Importantly, our group recently

reported that both IDC and the index tumor share a clonal

ancestry

[11] ,

a finding that could suggest that IDC-related

prometastatic tumor clones are, in fact, present during the

early phase of prostate cancer evolution, along with the

development and co-occurrence of multiple aggressive

features within the prostate gland. Herein, we posit a novel

concept of a prostate cancer

‘‘nimbosus

’’ (‘‘gathering of

stormy clouds’’; Latin) that is hallmarked by the sub-

pathologies of IDC and CA.

Nimbosus

highlights the

constellation of unfavorable indices of genomic instability,

increased hypoxia, and

SChLAP1

expression that are

associated with prostate cancers harboring these

subpathologies, and importantly, correlates with a poor

prognosis following radical prostatectomy or image-guided

radiotherapy.

2.

Patients and methods

2.1.

Patient cohorts

The study cohort comprised 1325 men with pathologically confirmed

National Comprehensive Cancer Network (NCCN)-defined low- to high-

risk prostate cancers, who received definitive treatment between

1987 and 2012: (Canadian) 103 radical prostatectomy cases from

CHU de Que´bec-Universite´ Laval (CHUdeQ-UL), and 70 prostatectomy

and 501 image-guided radiotherapy cases from University Health

Network (UHN); 258 prostatectomy cases from Memorial Sloan

Kettering Cancer Center (MSKCC), NY

[6,12]

; and 393 prostatectomy

cases from Erasmus Medical Center (EMC), Rotterdam

[13]

. An illustra-

tive summary of the Canadian and MSKCC cohorts that were used for the

respective clinical analyses is presented in the Supplementary material

(Supplementary Fig. 1). A tissue microarray (TMA) constructed using

prostatectomy specimens from the EMC cohort was used for RNA in situ

hybridization (RNA-ISH) testing. This cohort comprised men who were

diagnosed with prostate cancer in the scope of the European

Randomized Screening Study for Prostate Cancer

[13]

. The majority of

patients in our cohorts were hormone naı¨ve at the time of definitive

treatment; 71 patients (14.2%) from the UHN radiotherapy cohort and

seven (2.7%) from the MSKCC cohort received hormonal therapy with

their local treatment. Informed consent was obtained at the time of

clinical follow-up from all patients, and ethics approval was obtained

from all participating institutions.

2.2.

Pathological analysis for IDC/CA

All prostate tumors from UHN, MSKCC, and EMC were surveyed for IDC/

CA by expert genitourinary pathologists (C.K., A.G., G.v.L., V.R., and

T.v.d.K.) using previously reported criteria

[8] .

No attempt was made to

distinguish between IDC and CA because of their comparable prognostic

impact

[8,9]

.

Outcome measurements and statistical analysis:

IDC/CA was separately assessed for

biochemical relapse risk in the Canadian and MSKCC cohorts. Both cohorts were pooled

for analyses on metastasis.

Results and limitation:

Presence of IDC/CA independently predicted for increased risks of

biochemical relapse (HR

Canadian

2.17,

p

<

0.001; HR

MSKCC

2.32,

p

= 0.0035) and metastasis

(HR

pooled

3.31,

p

<

0.001). IDC/CA+ cancers were associated with an increased percentage of

genome alteration (PGA [median] 7.2 vs 3.0,

p

<

0.001), and hypoxia (64.0% vs 45.5%,

p

= 0.17). Combinatorial genomic–pathological indices offered the strongest discrimination

for metastasis (C-index 0.805 [clinical + IDC/CA + PGA] vs 0.786 [clinical + IDC/CA] vs

0.761 [clinical]). Profiling of mRNA abundance revealed that long noncoding RNA,

SChLAP1

,

was the only gene expressed at

>

3-fold higher (

p

<

0.0001) in IDC/CA+ than in IDC/CA–

tumors, independently corroborated by increased

SChLAP1

RNA in situ hybridization signal.

Optimal treatment intensification for IDC/CA+ prostate cancer requires prospective testing.

Conclusions:

The poor outcome associated with IDC and CA subpathologies is associated

with a constellation of genomic instability,

SChLAP1

expression, and hypoxia. We posit a

novel concept in IDC/CA+ prostate cancer, ‘‘

nimbosus

’’ (gathering of stormy clouds, Latin),

which manifests as increased metastatic capacity and lethality.

Patient summary:

A constellation of unfavorable molecular characteristics co-occur with

intraductal and cribriform subpathologies in prostate cancer. Modern imaging for surveil-

lance and treatment intensification trials should be considered in this adverse subgroup.

#

2017 European Association of Urology. Published by Elsevier B.V. All rights reserved.

Genomic instability

Hypoxia

SChLAP1

Prognosis

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