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For example, Decipher was able to identify a particularly

poor prognosis group, as 23% of the patients had Decipher

high risk, and of these, 21% developed metastases by 5 yr,

and strikingly 9.4% of them died of PCa at 5 yr, which places

them at much higher risk of mortality than the typical

patient with intermediate- or high-risk PCa. Such patients

would likely want to pursue the most aggressive therapies

possible for their PCa. If they choose radiation, they would

need to combine with long-term ADT, which has been

shown to reduce PCSM compared with short-term ADT

[22– 24]

, and may consider enrolling on a clinical trial

incorporating a novel agent or considering docetaxel, which

has been shown to improve 4-yr overall survival in men

with aggressive disease (1-sided

p

= 0.04, 2-sided

p

= 0.08)

[25]

. Those considering surgery would need to be prepared

for having a higher likelihood of requiring postoperative

adjuvant or salvage radiation and ADT, or might also

consider enrolling on a trial targeting those with highest-

risk localized disease.

This biopsy test may also allowmen with more moderate-

risk disease to tailor their therapy. For example, there is

currently controversy about whether all men with interme-

diate-risk PCa need ADT with their radiation. Patients with

intermediate-risk disease who have a low Decipher score on

biopsy might be adequately treated with dose-escalated

radiation alone and thereby forego the additional side effects

of ADT. However, as the majority of the patients in this study

who received radiation also received ADT, it is not yet

possible to make this conclusion. In a more general sense, it

must be acknowledged that this study has shown the biopsy

Decipher test to be a powerful prognostic marker, but it is not

yet known whether it is predictive for which patients will

benefit most from treatment intensification such as the

addition of ADT to radiation or the use of immediate adjuvant

therapies after surgery.

In previous studies, Klein et al

[11]

and Nguyen et al

[12]

showed separately that biopsy Decipher outperformed

clinical risk models for predicting metastasis post-RP and

post-RT + ADT, respectively. However, the study performed

by Klein et al

[11]

was a smaller (

n

= 57), single institution

cohort of mostly low- and intermediate-NCCN risk men, and

the study performed by Nguyen et al

[12] ,

was a single

institution study of men who received only RT and ADT. The

current multi-institutional study of 235 men is the largest

study of the performance of the biopsy Decipher score and is

novel in that it incorporates both radiation and surgically-

managed patients, and is the first to show the ability of the

biopsy Decipher to predict PCSM in this combined population.

Previously, Freedland et al

[26]

has studied the value of a

31-gene cell-cycle progression signature (Myriad) in biopsy

specimens of men who received RT or RT + ADT and found

that the signature was associated with biochemical recur-

rence and with PCSM, although there were only six PCSM

events. The current study is differentiated in that it looked

at a combined set of patients treated by either RP or

RT ADT and found that the genomic classifier could predict

for metastases and PCSM within this mixed-treatment cohort

[26] .

It should be noted that Bishoff et al

[27]

have also

evaluated the Myriad cell-cycle progression signature in

either simulated or actual diagnostic biopsies and found that

this signature could predict for biochemical recurrence and

metastases after RP.

The cohort size of this study was limited by access to

biopsy tissue from community and referral health centers.

Ninety-three percent of the unavailable cohort were either

unavailable or had inadequate tissue and 7.4% failed RNA

extraction. Of the 909 patients eligible for this study, only

235 had biopsy tissue available from the institution in

which the RPs or RT ADT were performed. A larger cohort

size with longer follow-up would have strengthened this

study and might have given more PCSM events to allow for a

MVA of predictors of PCSM rather than only univariable

analysis. Running multivariable models on a relatively small

number of events can also lead to issues with validity, and this

is why we fit the Cox models using an adaptation of Firth’s

penalized approach which was designed to minimize bias in

this scenario. Another limitation of our study was that the

majority of patients were NCCN intermediate or high risk and

we were not able to draw conclusions about Decipher among

low-risk patients, who only represented 10% of the patients in

the study. Such information would be useful to guide

decisions about treatment versus active surveillance. Of note,

a recent study of Gleason 6 prostatectomy samples found that

higher Decipher scores are associated with adverse pathology

at the time of prostatectomy

[28] .

Finally, ongoing work is

being performed to determine the concordance between

Decipher scores derived from biopsy versus prostatectomy

samples, which has been reported in prior small studies to be

64%, 75%, and 86%

[9–11]

.

5.

Conclusions

Despite these limitations, this is the largest analysis of

biopsy Decipher to date that shows Decipher predicts

metastasis post-biopsy, regardless of first-line treatment,

and also demonstrates its predictive ability for PCa

mortality. Our findings suggest that patients classified as

Decipher high risk have a very high 5-yr risk of distant

metastasis (21%) and PCSM (9.4%), and may therefore be

rationally subjected to multimodal therapy or enrolled into

clinical trials targeting men with highest-risk disease.

Author contributions:

Paul L. Nguyen had full access to all the data in the

study and takes responsibility for the integrity of the data and the

accuracy of the data analysis.

Study concept and design:

Nguyen, Ross, Feng, Klein.

Acquisition of data:

Nguyen, Ross, Martin, Lotan, Spratt, Stoyanova,

Punnen, Kane, Pollack, Davis, Klein.

Analysis and interpretation of data:

Nguyen, Haddad, Ross, Martin,

Deheshi, Chelliserry, Aranes, Margrave, Yousefi, Choeurng, Davicioni,

Kane, Feng, Klein.

Drafting of the manuscript:

Nguyen, Haddad, Deheshi, Yousefi, Choeurng,

Davicioni, Trock, Feng, Klein.

Critical revision of the manuscript for important intellectual content:

Nguyen, Haddad, Ross, Martin, Deheshi, Lam, Chelliserry, Tosoian, Lotan,

Spratt, Stoyanova, Punnen, Ong, Buerki, Aranes, Kolisnik, Margrave,

Yousefi, Choeurng, Davicioni, Trock, Kane, Pollack, Davis, Feng, Klein.

Statistical analysis:

Haddad, Yousefi, Choeurng, Trock.

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